LaTeX

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BibTeX - a reference management software
Beamer - a package for presentation slides
Listings - a package for putting programming code within LaTeX - http://tug.ctan.org/cgi-bin/ctanPackageInformation.py?id=listings
Latex can be used in the Doxygen documentation in order to inlcude formulas, biblio references etc

Editors

Kile
Emacs + plugin
Eclipse + TeXlipse

Windows

MiKTeX - LaTeX implementation
TeXnicCenter - editor

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